Package: CommKern
Version: 1.0.1
Title: Network-Based Communities and Kernel Machine Methods
Authors@R: c(person(given = "Alexandria", family = "Jensen",  email = "alexandria.jensen@cuanschutz.edu", role = c("aut", "cre"), comment = c(ORCID = "0000-0001-6337-9079")),
             person(given = "Peter",      family = "DeWitt",  email = "peter.dewitt@cuanschutz.edu",      role = c("ctb"),        comment = c(ORCID = "0000-0002-6391-0795")),
             person(given = "Debashis",   family = "Ghosh",   email = "debashis.ghosh@cuanschutz.edu",    role = c("ths"),        comment = c(ORCID = "0000-0001-6618-1316"))
             )
Description: Analysis of network community objects with applications to
        neuroimaging data. There are two main components to this
        package. The first is the hierarchical multimodal spinglass
        (HMS) algorithm, which is a novel community detection algorithm
        specifically tailored to the unique issues within brain
        connectivity. The other is a suite of semiparametric kernel
        machine methods that allow for statistical inference to be
        performed to test for potential associations between these
        community structures and an outcome of interest (binary or
        continuous).
Depends: R (>= 4.0.0)
License: GPL (>= 2)
Encoding: UTF-8
URL: https://github.com/aljensen89/CommKern
Language: en-us
LazyData: true
Imports: ggnewscale, ggplot2, gridExtra, Matrix, RColorBrewer, reshape2
Suggests: knitr, matrixcalc, pheatmap, rmarkdown
RoxygenNote: 7.2.1
VignetteBuilder: knitr
Config/pak/sysreqs: libicu-dev
Repository: https://aljensen89.r-universe.dev
Date/Publication: 2022-09-22 18:29:41 UTC
RemoteUrl: https://github.com/aljensen89/commkern
RemoteRef: HEAD
RemoteSha: 82f9840ba697b86e00bd26c9f03f7500d51c131e
NeedsCompilation: no
Packaged: 2026-06-22 08:00:56 UTC; root
Author: Alexandria Jensen [aut, cre] (ORCID:
    <https://orcid.org/0000-0001-6337-9079>),
  Peter DeWitt [ctb] (ORCID: <https://orcid.org/0000-0002-6391-0795>),
  Debashis Ghosh [ths] (ORCID: <https://orcid.org/0000-0001-6618-1316>)
Maintainer: Alexandria Jensen <alexandria.jensen@cuanschutz.edu>